Publications

The lab publications over the last 2 years:

2020

In vitro megakaryocyte culture from human bone marrow aspirates as a research and diagnostic tool
Butov KR, Osipova EY, Mikhalkin NB, Trubina NM, Panteleev MA, Machlus KR.
Platelets. 2020;1-8. doi:10.1080/09537104.2020.1817359 [published online ahead of print, 2020 Sep 16].

Mechanisms of microtubule dynamics and force generation examined with computational modeling and electron cryotomography.
Gudimchuk NB, Ulyanov EV, O’Toole E, Page CL, Vinogradov DS, Morgan G, Li G, Moore JK, Szczesna E, Roll-Mecak A, Ataullakhanov FI, Richard McIntosh J.
Nat Commun. 2020 Jul 28;11(1):3765. doi: 10.1038/s41467-020-17553-2. PMID: 32724196

Ahmed MU, Kaneva V, Loyau S, Nechipurenko D, Receveur N, Le Bris M, Janus-Bell E, Didelot M, Rauch A, Susen S, Chakfé N, Lanza F, Gardiner EE, Andrews RK, Panteleev M, Gachet C, Jandrot-Perrus M, Mangin PH
Pharmacological Blockade of GPVI Promotes Thrombus Disaggregation in the Absence of Thrombin
Arterioscler Thromb Vasc Biol. 2020 Jul 23:ATVBAHA120314301. doi: 10.1161/ATVBAHA.120.314301. Epub ahead of print. PMID: 32698684.

Redistribution of TPA Fluxes in the Presence of PAI-1 Regulates Spatial Thrombolysis
Shibeko AM, Chopard B, Hoekstra AG, Panteleev MA
Biophys J. 2020;S0006-3495(20)30496-3. doi:10.1016/j.bpj.2020.06.020

Dynamics of coagulopathy in patients with different COVID-19 severity
Kalinskaya, A., Dukhin, O., Molodtsov, I., Maltseva, A., Sokorev, D., Elizarova, A., Sapozhnikova, O., Glebova, K., Stonogina, D., Shakhidzhanov, S., Nikonov, E., Mazus, A., Spiridonov, I., Ataullakhanov, F., Margolis, L., Shpektor, A., & Vasilieva, E.
Preprint. medRxiv: the preprint server for health sciences, 2020.07.02.20145284. doi: 10.1101/2020.07.02.20145284

Development of a Simple Kinetic Mathematical Model of Aggregation of Particles or Clustering of Receptors
Garzon Dasgupta AK, Martyanov AA, Filkova AA, Panteleev MA, Sveshnikova AN
Life (Basel). 2020;10(6):E97. Published 2020 Jun 26. doi:10.3390/life10060097

Protein Complex NDC80: Properties, Functions, and Possible Role in Pathophysiology of Cell Division.
Ustinov NB, Korshunova AV, Gudimchuk NB.
Biochemistry (Mosc). 2020;85(4):448-462. doi:10.1134/S0006297920040057

Platelet function and bleeding in chronic lymphocytic leukemia and mantle cell lymphoma patients on ibrutinib.
Dmitrieva EA, Nikitin EA, Ignatova AA, Vorobyev VI, Poletaev AV, Seregina EA, Voronin KA, Polokhov DM, Maschan AA, Novichkova GA, Panteleev MA, Ptushkin VV.
J Thromb Haemost. 2020 Jun 8. doi: 10.1111/jth.14943. Epub ahead of print. PMID: 32511880.

Use of Thrombodynamics for revealing the participation of platelet, erythrocyte, endothelial, and monocyte microparticles in coagulation activation and propagation.
Lipets EN, Antonova OA, Shustova ON, Losenkova KV, Mazurov AV, Ataullakhanov FI.
PLoS One. 2020;15(5):e0227932. Published 2020 May 29. doi:10.1371/journal.pone.0227932

Heterogeneity of Integrin α(IIb)β(3) Function in Pediatric Immune Thrombocytopenia Revealed by Continuous Flow Cytometry Analysis
Martyanov AA, Morozova DS, Sorokina MA, Filkova AA, Fedorova DV, Uzueva SS, Suntsova EV, Novichkova GA, Zharkov PA, Panteleev MA, Sveshnikova AAN
Int J Mol Sci. 2020 Apr 25;21(9). pii: E3035. doi: 10.3390/ijms21093035. PubMed PMID: 32344835

Panteleev MA, Andreeva AA, Lobanov AI.
Drug target selection in blood coagulation: what can we get from computational systems biology models? [published online ahead of print, 2020 Apr 5].
Curr Pharm Des. 2020; doi:10.2174/1381612826666200406091807

Erythrocytes as Carriers: From Drug Delivery to Biosensors
Koleva L, Bovt E, Ataullakhanov F, Sinauridze E.
Pharmaceutics. 2020;12(3):E276. Published 2020 Mar 18. doi:10.3390/pharmaceutics12030276

In vitro flow based systems to study platelet function and thrombus formation: Recommendations for standardization: Communication from the SSC on Biorheology of the ISTH.
Mangin, P. H., Gardiner, E. E., Nesbitt, W. S., Kerrigan, S. W., Korin, N., Lam, W. A., Panteleev, M. A., & Subcommittee on Biorheology (2020).
Journal of thrombosis and haemostasis: JTH, 2020, 18(3), 748–752. https://doi.org/10.1111/jth.14717

2019

Platelet function and blood coagulation system status in childhood essential thrombocythemia
Polokhov DM, Ershov NM, Ignatova AA, Ponomarenko EA, Gaskova MV, Zharkov PA, Fedorova DV, Poletaev AV, Seregina EA, Novichkova GA, Smetanina NS, Panteleev MA
Platelets. 2019 Dec 19:1-11. doi: 10.1080/09537104.2019.1704710

Shear rate gradients promote a bi-phasic thrombus formation on weak adhesive proteins, such as fibrinogen in a VWF-dependent manner
Receveur N, Nechipurenko D, Knapp Y, Yakusheva A, Maurer E, Denis CV, Lanza F, Panteleev M, Gachet C, Mangin PH
Haematologica. 2019 Nov 14. pii: haematol.2019.235754. doi:10.3324/haematol.2019.235754.

Premorbid Hemostasis in Women with a History of Pregnancy Loss
Peshkova AD, Safiullina SI, Evtugina NG, Baras YS, Ataullakhanov FI, Weisel JW, Litvinov RI
Thromb Haemost. 2019 Oct 6. doi: 10.1055/s-0039-1696972. [Epub ahead of print] PubMed PMID: 31587245

Mechanical properties of tubulin intra- and inter-dimer interfaces and their implications for microtubule dynamic instability
Fedorov VA, Orekhov PS, Kholina EG, Zhmurov AA, Ataullakhanov FI, Kovalenko IB, Gudimchuk NB.
PLoS Comput Biol. 2019 Aug 30;15(8):e1007327. doi: 10.1371/journal.pcbi.1007327. [Epub ahead of print] PubMed PMID: 31469822.

Evolution of platelet function in adult patients with chronic immune thrombocytopenia on romiplostim treatment
Ignatova AA, Demina IA, Ptushkin VV, Khaspekova SG, Shustova ON, Pankrashkina MM, Ryabykh AA, Obydennyi SI, Strelkova OS, Polokhov DM, Seregina EA, Poletaev AV, Ataullakhanov FI, Kireev II, Mazurov AV, Maschan AA, Novichkova GA, Panteleev MA.
Br J Haematol. 2019 Aug 18. doi:10.1111/bjh.16164. [Epub ahead of print] PubMed PMID: 31422582.

Mechanisms of increased mitochondria-dependent necrosis in Wiskott-Aldrich syndrome platelets
Obydennyi SI, Artemenko EO, Sveshnikova AN, Ignatova AA, Varlamova TV, Gambaryan S, Lomakina GY, Ugarova NN, Kireev II, Ataullakhanov FI, Novichkova GA, Maschan AA, Shcherbina A, Panteleev M
Haematologica. 2019 Jul 5. pii: haematol.2018.214460. doi: 10.3324/haematol.2018.214460. [Epub ahead of print] PubMed PMID: 31278208.

Computer Design of Low-Molecular-Weight Inhibitors of Coagulation Factors
Kabankin AS, Sinauridze EI, Lipets EN, Ataullakhanov FI
Biochemistry (Mosc). 2019 Feb;84(2):119-136. doi: 10.1134/S0006297919020032. Review. PubMed PMID: 31216971

Fine structure and dynamics of EB3 binding zones on microtubules in fibroblast cells
Mustyatsa VV, Kostarev AV, Tvorogova AV, Ataullakhanov FI, Gudimchuk NB, Vorobjev IA
Mol Biol Cell. 2019 May 29:mbcE18110723. doi:10.1091/mbc.E18-11-0723.

An enhanced clot growth rate before in vitro fertilization decreases the probability of pregnancy
Balandina AN, Koltsova EM, Teterina TA, Yakovenko AG, Simonenko EU, Poletaev AV, Zorina IV, Shibeko AM, Vuimo TA, Yakovenko SA, Ataullakhanov FI
PLoS One. 2019 May 23;14(5):e0216724. doi:10.1371/journal.pone.0216724. eCollection 2019. PubMed PMID: 31120933.

Rat liver folate metabolism can provide an independent functioning of associated metabolic pathways
Zaitsev AV, Martinov MV, Vitvitsky VM, Ataullakhanov FI
Sci Rep. 2019 May 21;9(1):7657. doi: 10.1038/s41598-019-44009-5. PubMed PMID: 31113966.

Quantitative dynamics of reversible platelet aggregation: mathematical modelling and experiments
Filkova AA, Martyanov AA, Garzon Dasgupta AK, Panteleev MA, Sveshnikova AN.
Sci Rep. 2019 Apr 17;9(1):6217. doi: 10.1038/s41598-019-42701-0. PubMed PMID: 30996289.

Microtubule end conversion mediated by motors and diffusing proteins with no intrinsic microtubule end-binding activity
Chakraborty M, Tarasovetc EV, Zaytsev AV, Godzi M, Figueiredo AC, Ataullakhanov FI, Grishchuk EL.
Nat Commun. 2019 Apr 11;10(1):1673. doi: 10.1038/s41467-019-09411-7. PubMed PMID: 30975984.

Binding of Coagulation Factor XIII Zymogen to Activated Platelet Subpopulations: Roles of Integrin αIIbβ3 and Fibrinogen
Kotova YN, Podoplelova NA, Obydennyy SI, Kostanova EA, Ryabykh AA, Demyanova AS, Biriukova MI, Rosenfeld MA, Sokolov AV, Chambost H, Kumskova MA, Ataullakhanov FI, Alessi MC, Panteleev MA
Thromb Haemost. 2019 Apr 1. doi: 10.1055/s-0039-1683912.

New factor Xa inhibitors based on 1,2,3,4-tetrahydroquinoline developed by molecular modelling
Ilin I, Lipets E, Sulimov A, Kutov D, Shikhaliev K, Potapov A, Krysin M, Zubkov F, Sapronova L, Ataullakhanov F, Sulimov V.
J Mol Graph Model. 2019 Mar 16;89:215-224. doi: 10.1016/j.jmgm.2019.03.017.

Watching microtubules grow one tubulin at a time
Gudimchuk N, Roll-Mecak A.
Proc Natl Acad Sci U S A. 2019 Mar 25. pii: 201902991. doi: 10.1073/pnas.1902991116.

Elevated pre-activation basal level of nuclear NF-κB in native macrophages accelerates LPS-induced translocation of cytosolic NF-κB into the cell nucleus
Bagaev AV, Garaeva AY, Lebedeva ES, Pichugin AV, Ataullakhanov RI, Ataullakhanov FI.
Sci Rep. 2019 Mar 14;9(1):4563. doi: 10.1038/s41598-018-36052-5. PubMed PMID: 30872589.

C1-esterase inhibitor enhances thrombin generation and spatial fibrin clot propagation in the presence of thrombomodulin
Tarandovskiy ID, Buehler PW, Ataullakhanov FI, Karnaukhova E.
Thromb Res. 2019 Feb 12;176:54-60. doi:10.1016/j.thromres.2019.02.013. [Epub ahead of print] PubMed PMID: 30784776

The hemostasis system in children with hereditary spherocytosis
Seregina EA, Poletaev AV, Bondar EV, Vuimo TA, Ataullakhanov FI, Smetanina NS
Thromb Res. 2019 Feb 5;176:11-17. doi: 10.1016/j.thromres.2019.02.004. [Epub ahead of print] PubMed PMID: 30763822

Erythrocytes as bioreactors to decrease excess ammonium concentration in blood
Protasov ES, Borsakova DV, Alexandrovich YG, Korotkov AV, Kosenko EA, Butylin AA, Ataullakhanov FI, Sinauridze EI.
Sci Rep. 2019 Feb 6;9(1):1455. doi: 10.1038/s41598-018-37828-5. PubMed PMID: 30728433; PubMed Central PMCID: PMC6365525.

The binding of Borealin to microtubules underlies a tension independent kinetochore-microtubule error correction pathway
Trivedi P, Zaytsev AV, Godzi M, Ataullakhanov FI, Grishchuk EL, Stukenberg PT.
Nat Commun. 2019 Feb 8;10(1):682. doi: 10.1038/s41467-019-08418-4. PubMed PMID: 30737408.

Clot Contraction Drives the Translocation of Procoagulant Platelets to Thrombus Surface.
Nechipurenko DY, Receveur N, Yakimenko AO, Shepelyuk TO, Yakusheva AA, Kerimov RR, Obydennyy SI, Eckly A, Léon C, Gachet C, Grishchuk EL, Ataullakhanov FI, Mangin PH, Panteleev MA.
Arterioscler Thromb Vasc Biol. 2019 Jan;39(1):37-47. doi: 10.1161/ATVBAHA.118.311390. PubMed PMID: 30580561.

 

The list of earlier publications